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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs6715381 chr2:48825955 T/C 7.54E-5 119 2.47 14.52 14.78 KM Plot
UCEC rs71133646 chr16:3636360 T/TA 0.000135 121 12.92 14.9 18.42 KM Plot
UCEC rs71399066 chr2:48833278 ATAAAG/A 2.16E-5 124 14.78 13.33 11.17 KM Plot
UCEC rs7272535 chr20:44159889 G/A 4.16E-5 121 14.87 7.07 1.77 KM Plot
UCEC rs72824139 chr2:48825877 T/C 2.03E-8 121 13.37 16.17 11.17 KM Plot
UCEC rs73341361 chr20:25634013 C/T 1.29E-5 123 13.7 17.1 6.65 KM Plot
UCEC rs73343217 chr20:25669568 C/T 9.97E-6 125 13.7 17.1 6.65 KM Plot
UCEC rs7553536 chr1:213064209 A/G 9.5E-8 125 2.38 10.57 14.67 KM Plot
UCEC rs7578339 chr2:48832506 G/C 2.01E-6 124 14.78 11.67 6.33 KM Plot
UCEC rs7578343 chr2:48832513 G/C 7.62E-10 125 14.03 15.17 11.47 KM Plot
UCEC rs7604334 chr2:48832433 A/G 7.62E-10 125 14.03 15.17 11.47 KM Plot
UCEC rs76576409 chr1:213079763 C/T 1.44E-7 123 14.65 10.97 2.38 KM Plot
UCEC rs78174833 chr2:48826095 C/A 2.82E-5 121 14.78 14.52 2.47 KM Plot
UCEC rs78937603 chr10:51580467 C/G 0 121 14.03 11.47 1.67 KM Plot
UCEC rs79628747 chr15:33767642 G/T 9.59E-5 124 13.33 14.1 12.57 KM Plot